[R] incidence_fit model for simulation

[Vito Michele Rosario Muggeo]

dear all,
In addition to the thorough and intuitive incidence package, I would  
like to indicate a technical report on the same topic. R code and  
worked examples are reported.

https://www.researchgate.net/publication/340664370_Modelling_COVID-19_outbreak_segmented_regression_to_assess_lockdown_effectiveness

best,
vito



Sarah Goslee <sarah.goslee using gmail.com> ha scritto:

> According to this handy vignette, the object contains the predicted
> values in $pred
>
> https://cran.r-project.org/web/packages/incidence/vignettes/overview.html
>
> early.fit <- fit(i.7[1:20])
> early.fit
> #> <incidence_fit object>
> #>
> #> $model: regression of log-incidence over time
> #>
> #> $info: list containing the following items:
> #>   $r (daily growth rate):
> #> [1] 0.03175771
> #>
> #>   $r.conf (confidence interval):
> #>           2.5 %     97.5 %
> #> [1,] 0.02596229 0.03755314
> #>
> #>   $doubling (doubling time in days):
> #> [1] 21.8261
> #>
> #>   $doubling.conf (confidence interval):
> #>         2.5 %   97.5 %
> #> [1,] 18.45777 26.69823
> #>
> #>   $pred: data.frame of incidence predictions (20 rows, 5 columns)
>
> Sarah
>
> On Fri, Apr 24, 2020 at 11:52 AM <maicel using infomed.sld.cu> wrote:
>>
>> Hello
>>
>> How can I make a prediction with object type incidence_fit.
>> incidence_fit object is returned by the function fit in library(incidence).
>>
>> Best regard
>> maicel
>>
>>
>> ----------------------------------------------------------------
>>
>>
>>
>>
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>
>
>
> --
> Sarah Goslee (she/her)
> http://www.numberwright.com
>
> ______________________________________________
> R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.