[R] Meta-analysis on microaray data, when a sinlge experiment contains diferent tissues

Mohammadian moh@mm@d|@n02 @end|ng |rom gm@||@com
Sat Sep 21 10:37:45 CEST 2019


Thank for the prompt response.

On 9/21/19, ঋষি  ( ऋषि / rIsHi ) <rishi.dasroy using gmail.com> wrote:
> Yes this is not the best place, rather it should be better asked in
> bioinformatics forums like biostar and bioconductor.
>
> On Sat, Sep 21, 2019 at 11:08 AM Mohammadian <mohammadian02 using gmail.com>
> wrote:
>
>> Hi!
>>
>> I dont know whether this is the best place to ask this question, however:
>>
>> Suppose I want to perform meta-analysis on 10 different microarray
>> studies.
>>
>> Study   Tissue-source
>> Study1     Neuron
>> Study2     Blood
>> Study3     Neuron and PBMC
>> ......
>> Study10   ...
>>
>> How should I treat Study3?
>> The R package I want to use is among MetaMA, MetaDE, and perhaps
>> crossMeta
>> Even a reference article/book/tutorial would be appreciated.
>>
>> Thanks in advance
>>
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>> and provide commented, minimal, self-contained, reproducible code.
>>
>
>
> --
>
>
>
> With regards
> Rishi Das Roy
>



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