[R] Finding the Mean of a Specific Set of Columns

[Isaac Barnhart]

Thanks for the help!


Isaac



________________________________
From: Marc Schwartz <marc_schwartz using me.com>
Sent: Thursday, February 14, 2019 11:05:23 AM
To: Isaac Barnhart
Cc: R-help
Subject: Re: [R] Finding the Mean of a Specific Set of Columns

On Feb 14, 2019, at 9:31 AM, Isaac Barnhart <ihb using ksu.edu> wrote:
>
> I am having trouble finding the mean of a specific part of my dataset. Here is a sample of it:
>
> plot lai leaf
> 1 104 82 1
> 2 104 167 2
> 3 104 248 3
> 4 104 343 4
> 5 104 377 5
> 6 105 64 1
> 7 105 139 2
> 8 105 211 3
> 9 105 296 4
> 10 105 348 5
> 11 106 94 1
> 12 106 167 2
> 13 106 243 3
> 14 106 281 4
> 15 106 332 5
> 16 108 83 1
> 17 108 382 2
> 18 108 320 3
> 19 108 146 4
> 20 108 129 5
>
> I have many different plot numbers, none of which follow any kind of specific numeric sequence (even though I have sorted them from smallest to largest). I need to take the average (mean) of the LAI for each plot, and was wondering if there was a way to specify the code to do this. For example: I need the average of all the LAI measurements for each leaf of plot 104, 105, etc. Any help would be appreciated. Thanks!


Hi,

This is easy using base R functions. See ?aggregate, ?by and ?tapply for a starting place.

For example:

> aggregate(lai ~ plot, data = DF, FUN = mean)
  plot   lai
1  104 243.4
2  105 211.6
3  106 223.4
4  108 212.0

Regards,

Marc Schwartz




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