[R] Plotting Notched Box Plots Log Scale - Losing bottom portion of box plot
bgunter.4567 at gmail.com
Wed Mar 21 21:48:31 CET 2018
In bxp(list(stats = c(10.66, 13.9, 24.9, 39, 60, 10.05, 10.07515, :
some notches went outside hinges ('box'): maybe set notch=FALSE
## Both work, but:
Error in plot.window(xlim = xlim, ylim = ylim, log = log, yaxs = pars$yaxs)
Logarithmic axis must have positive limits
So the problem is some of your notches want to extend to negative values.
Limiting the y range can't help: the notches can't be plotted on a log
"The trouble with having an open mind is that people keep coming along and
sticking things into it."
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On Wed, Mar 21, 2018 at 12:52 PM, David Doyle <kydaviddoyle at gmail.com>
> I'm using the code below to generate some notched box plots. The issue is
> whenever I use log scale, the sides of the bottom part of the box plots
> don't plot. I've tried it in RStudio Ver 1.1.419 and R version 3.4.3 and I
> get the same result.
> The code and link to my data is below.
> Thank you for your time
> MyData <- read.table("http://doylesdartden.com/ExampleIron.CSV",
> header=TRUE, sep=",")
> MyDataIronx <- c("Location", "Iron")
> MyDataIron <- MyData[MyDataIronx]
> plot(MyDataIron, notch=TRUE,log = "y",ylim=c(0.01, 100))
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