[R] what does the within component of varcomp (ape library) output indicate?
bgunter.4567 at gmail.com
Mon Jan 22 16:26:13 CET 2018
Probably not without knowing the structure of your data.
"The trouble with having an open mind is that people keep coming along and
sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )
On Mon, Jan 22, 2018 at 2:55 AM, Sharada Ramadass <
sharada.ramadass at gmail.com> wrote:
> I am trying to use varcomp to obtain the variance partitioning across
> different nested levels of random effects (say x,y and z). I get the
> three variance components (for each of my along with an additional one
> called 'within' from varcomp output. I am using the 'scale total
> variance to 1' option and though the within component is small, it
> does form a part of what explains the complete variance. I am unable
> to understand what variance this 'within' defines.
> Can someone kindly explain or provide a reference?
> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
> PLEASE do read the posting guide http://www.R-project.org/
> and provide commented, minimal, self-contained, reproducible code.
[[alternative HTML version deleted]]
More information about the R-help