[R] Error In DESeq installation

[Martin Morgan]

On 10/23/2016 10:13 PM, Yogesh Gupta wrote:
> Dear All,
>
> I am getting error in DESeq installation in R.
>
> package ‘DESeq’ is not available (for R version 3.3.1)
>> source("http://www.Bioconductor.org/biocLite.R")
> Bioconductor version 3.4 (BiocInstaller 1.24.0), ?biocLite for help
>> biocLite("BiocUpgrade")
> Error: Bioconductor version 3.4 cannot be upgraded with R version 3.3.1
>
> Can you suggest me I How I can resolve it.

Ask questions about Bioconductor packages on the Bioconductor support forum

  https://support.bioconductor.org

DESeq was replaced by DESeq2, but is still available; provide (on the 
Bioconductor support site) the complete output of the installation 
attempt and sessionInfo().

'BiocUpgrade' is to update to a more recent version of Bioconductor. 
There is a 'devel' version that is m ore recent that 3.4, but it 
requires R-devel.

Martin

>
> Thanks
> Yogesh
>
>
> *Yogesh Gupta*
> *Postdoctoral Researcher*
> *Department of Biological Science*
> *Seoul National University*
> *Seoul, South Korea*
> web) http://biosci.snu.ac.kr/jiyounglee
> *Cell No. +82-10-6453-0716*
>
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>
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