[R] Defining contrasts within function
Axel Urbiz
axel.urbiz at gmail.com
Tue May 24 02:17:00 CEST 2016
Dear All,
I'd like to change the options("contrasts") within a function, such that
"identity" contrasts
are created for unordered factors. I'm following the idea shown below,
which works fine.
However, when I include these functions in a package (with `contr` being
exported, but
`contr_identity` not exported as it is not intended to be called directly
by the user), I get
the following error message. And this is after loading and attaching the
package with library(). Why is `contr_identity` not found?
Error in get(ctr, mode = "function", envir = parent.frame()) :
object 'contr_identity' of mode 'function' was not found
contr <- function(x) {
ocontrasts <- options(contrasts = c(unordered = "contr_identity", ordered =
"contr.diff"))
on.exit(options(ocontrasts))
contrasts(x)
}
contr_identity <- function(n, contrasts) {
contr.treatment(n, contrasts = FALSE)
}
f <- gl(2, 8, labels = c("Control", "Treat"))
contrasts(f)
contr(f)
Thanks,
Axel.
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