[R] Kendall heat map

Shane Carey careyshan at gmail.com
Fri Jun 17 12:13:52 CEST 2016


I also need the significance value

Thanks

On Fri, Jun 17, 2016 at 11:11 AM, boB Rudis <bob at rudis.net> wrote:

> Did you try:
>
>     cor(mat, method="kendall", use="pairwise")
>
> That only provides the matrix (so the equiv of the $r list component),
> but that seems to be all you need.
>
> On Fri, Jun 17, 2016 at 5:47 AM, Shane Carey <careyshan at gmail.com> wrote:
> > Hi,
> >
> > I was hoping someone could help me. I was wondering are there any
> libraries
> > available to undertake a kendall correlation on a matrix of data, in the
> > same way as what can be undertaken with the rcorr function:
> >
> > cormatrix = rcorr(as.matrix(A), type='spearman')
> > cordata = melt(cormatrix$r)
> > ggplot(cordata, aes(x=Var1, y=Var2, fill=value)) +
> >   geom_tile() + xlab("") + ylab("")
> >
> > Thanks
> >
> > --
> > Le gach dea ghui,
> > Shane
> >
> >         [[alternative HTML version deleted]]
> >
> > ______________________________________________
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> > PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
>



-- 
Le gach dea ghui,
Shane

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