[R] can't install DESEq2 on Mac

Thu Oct 8 23:30:24 CEST 2015

Please ask questions about Bioconductor packages on the Bioconductor support site, https://support.bioconductor.org. This looks like R encountered an http error instead of the file it was expecting. Martin

> -----Original Message-----
> From: R-help [mailto:r-help-bounces at r-project.org] On Behalf Of Dawn
> Sent: Thursday, October 08, 2015 1:32 PM
> To: r-help mailing list
> Subject: [R] can't install DESEq2 on Mac
> 
> Hi,
> 
> I can't install DESEq2 on my iMac, as follows:
> 
> > source("http://bioconductor.org/biocLite.R")
> Bioconductor version 3.1 (BiocInstaller 1.18.4), ?biocLite for help
> > biocLite("DESeq2")
> BioC_mirror: http://bioconductor.org
> Using Bioconductor version 3.1 (BiocInstaller 1.18.4), R version 3.2.2.
> Installing package(s) ‘DESeq2’
> Error: Line starting '<!DOCTYPE HTML PUBLI ...' is malformed!
> 
> Can you please help that? Thank you!
> Dawn
> 
> 	[[alternative HTML version deleted]]
> 
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