[R] preprocessing problem
Amit Sengupta
asengupta94404 at yahoo.com
Mon Oct 5 21:14:33 CEST 2015
Hi,I am having a problem with the ReadAffy() in the university R programming environment. I install affyPLM and invoke library(affyPLM) in the following way. I have the cel files in the craig subdirectory. Please let me know how to resolve the problem.Amit
source("http://bioconductor.org/biocLite.R") biocLite("affyPLM") biocLite("gcrma") library(affyPLM)> setwd("c:/Users/amit.sengupta/Desktop/myRfolder/craig")
> craig.data=ReadAffy()
Error in AllButCelsForReadAffy(..., filenames = filenames, widget = widget, :
No cel filennames specified and no cel files in specified directory:c:/Users/amit.sengupta/Desktop/myRfolder/craig
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