[R] Error in dis[sppInSample, sppInSample]:subscript out of bounds
macqueen1 at llnl.gov
Thu Apr 2 01:43:28 CEST 2015
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On 4/1/15, 2:04 PM, "marion howard" <marion.howard at hotmail.com> wrote:
>I am new to R and am encountering an error message that I cannot find a
>I am attempting to calculate MPD (mean pairwise distance), without
>weighting for abundance, with a community species list and a phylogenetic
>tree in newick format with branch lengths.
>I have read in both list and tree .txt files and calculated PD without
>To calculate MPD I have entered:>MPD1=mpd(list,cophenetic(tree))
>Error:Error in dis[sppInSample, sppInSample] : subscript out of bounds
>Thank you for you helpCheersMarion.
> [[alternative HTML version deleted]]
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