[R] Regarding R package spatstat

Rolf Turner r.turner at auckland.ac.nz
Tue Sep 30 23:17:47 CEST 2014


Why are you trying to install version 1.26-0?  That is very ancient; it 
dates from April 2012.

The version currently on CRAN is 1.38-1.  I would suggest that you try that.

I have no idea why your installation is hanging at the byte-compile 
stage, nor any idea how to diagnose the problem.  I tried a test just
now and managed to do an install of version 1.26-0 with no problems and 
no hangup.

cheers,

Rolf Turner

P. S.  I am puzzled as to how you are getting 'Target "all" is up to 
date' given that you are installing from the tarball.  This should only 
happen when you install from the unpacked *directory* "spatstat" (after
a previous install which would have built the required shared object 
library). Also, when I go through that process I get

> make: Nothing to be done for `all'.

rather than  'Target "all" is up to date'.  So something has been 
altered in your system, it would appear.  Hard to say what.

R. T.

On 01/10/14 00:58, shivali gangwar wrote:
> Hi ,
>
> I am installing a R Package as following -
>   R CMD INSTALL spatstat_1.26-0.tar.gz
>
> It seems my installation hangs at
>
>   "byte-compile and prepare package for lazy loading"
> I kept on waiting for 1/2anhr but it hanged at below stage.
> Please help.
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> Target "all" is up to date.
> installing to
> /gpfs1/home/shivali/R-3.1.0/R-3.1.0/lib/R/library/spatstat/libs
> ** R
> ** data
> *** moving datasets to lazyload DB
> ** demo
> ** inst
> ** byte-compile and prepare package for lazy loading
>
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~````
>
> [ncmr0202][/gpfs1/home/shivali]> ps -ef | grep R-3.1.0
>   shivali 438938 446478   0 17:23:40  pts/9  0:00 grep R-3.1.0
>   shivali 635448 381678   0 17:12:03 pts/14  0:00 sh
> /gpfs1/home/shivali/R-3.1.0/R-3.1.0/lib/R/bin/Rcmd INSTALL
> spatstat_1.26-0.tar.gz
>   shivali 316220 635448 118 17:12:04 pts/14 10:58
> /gpfs1/home/shivali/R-3.1.0/R-3.1.0/lib/R/bin/exec/R --args --args --args
> nextArgspatstat_1.26-0.tar.gz
>   shivali 344832      1 118 16:23:05 pts/14 60:26
> /gpfs1/home/shivali/R-3.1.0/R-3.1.0/lib/R/bin/exec/R --args --args --args
> nextArgSpatialVx_0.2-1.tar.gz
> [ncmr0202][/gpfs1/home/shivali]>


-- 
Rolf Turner
Technical Editor ANZJS



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