[R] problem in getVarianceStabilizedData

Jeff Newmiller jdnewmil at dcn.davis.CA.us
Mon Jan 27 11:10:21 CET 2014

Please don't cross-post per R-help posting guide.

The "data" function is not itself data. Provide your data to the function using the name you assign to it according to the getVarianceStabilizedData function documentation.
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Suparna Mitra <suparna.mitra.sm at gmail.com> wrote:
> Hi All,
>I am having a problem while running getVarianceStabilizedData in DDSeq2
>Error in (function (classes, fdef, mtable)  :
>unable to find an inherited method for function �dispersionFunction�
>signature �"CountDataSet"�
>Though the function looks okay
>> dispersionFunction
>standardGeneric for "dispersionFunction" defined from package "DESeq2"
>function (object)
><environment: 0x7fe7a9c5d140>
>Methods may be defined for arguments: object
>Use  showMethods("dispersionFunction")  for currently available ones.
>Can anybody please help?
>	[[alternative HTML version deleted]]
>R-help at r-project.org mailing list
>PLEASE do read the posting guide
>and provide commented, minimal, self-contained, reproducible code.

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