[R] Subscript out of bounds

[Keniajin Wambui]

Here is the error am getting

Error:  chunk 1
Error in tt[[ll[v]]] : subscript out of bounds
Error in rle(filenames) : 'x' must be an atomic vector
Calls: <Anonymous> -> <Anonymous> -> RweaveTryStop
Execution halted


On Wed, Nov 27, 2013 at 9:25 AM, Keniajin Wambui <kiangati at gmail.com> wrote:
> Dear Jeff;
> Below is the output for sessioninfo()
>
> R version 3.0.2 (2013-09-25)
> Platform: x86_64-w64-mingw32/x64 (64-bit)
>
> locale:
> [1] LC_COLLATE=English_United Kingdom.1252  LC_CTYPE=English_United
> Kingdom.1252
> [3] LC_MONETARY=English_United Kingdom.1252 LC_NUMERIC=C
> [5] LC_TIME=English_United Kingdom.1252
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> loaded via a namespace (and not attached):
> [1] tools_3.0.2
>
> On Tue, Nov 26, 2013 at 9:00 PM, Jeff Newmiller
> <jdnewmil at dcn.davis.ca.us> wrote:
>> This is the kind of question where including the output of sessionInfo() is a really good idea.
>>
>> This would, for example, answer the question of whether you are in fact using the x64 version of R.
>> ---------------------------------------------------------------------------
>> Jeff Newmiller                        The     .....       .....  Go Live...
>> DCN:<jdnewmil at dcn.davis.ca.us>        Basics: ##.#.       ##.#.  Live Go...
>>                                       Live:   OO#.. Dead: OO#..  Playing
>> Research Engineer (Solar/Batteries            O.O#.       #.O#.  with
>> /Software/Embedded Controllers)               .OO#.       .OO#.  rocks...1k
>> ---------------------------------------------------------------------------
>> Sent from my phone. Please excuse my brevity.
>>
>> Keniajin Wambui <kiangati at gmail.com> wrote:
>>>I am using R3.0.2 on a windows 64 bit machine. I building a .rnw file
>>>from an .r file. I am using MikTex as the engine for latex. The
>>>function dtaStata <- read.dta("core2.dta", convert.dates=TRUE) works
>>>well in .R but; When I try reading a dta (stata) file I get an error
>>>"subscript out of bounds". The file has 52 variables and over 90000
>>>observations
>>>
>>>Below is the code in latex
>>>
>>>\section{Introduction}
>>>The following clinical variables are in the core data set
>>>
>>><<echo=false, results=hide>>=
>>>#setting the working directory
>>>setwd("H:/Rjob/coreGraphs/core2Report/")
>>>
>>>#load the packages
>>>library(ggplot2)
>>>library(foreign)
>>>library(reshape2)
>>>library(psych)
>>>library(epicalc)
>>>library(plyr)
>>>library(doBy) #used to summarize
>>>
>>>##load the core 2 data
>>>dtaStata <- read.dta("core2.dta", convert.dates=TRUE)
>>>dtaStata <- as.data.frame(dtaStata)
>>>dtaStata$ndad<-as.Date(dtaStata$ndad, origin='1960-01-01')
>>>totalData <- table(dtaStata$yr)
>>>#variables in core2
>>>@
>>>the data has \Sexpr{ncol(dtaStata)} columns \Sexpr{getwd()}
>>>\clearpage
>>>\end{document}
>>
>
>
>
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> Mega Six Solutions
> Web Designer and Research Consultant



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Mega Six Solutions
Web Designer and Research Consultant