[R] Displaying median value over the horizontal(median)line in the boxplot
arun
smartpink111 at yahoo.com
Thu Mar 21 21:46:45 CET 2013
Hi,
Just a modified version with colnames as titles
set.seed(45)
test1<-data.frame(columnA=rnorm(7,45),columnB=rnorm(7,10))
par(mfrow=c(1,2))
lapply(seq_len(ncol(test1)),function(i) {b<- boxplot(test1[,i],range=0,horizontal=TRUE,main=colnames(test1[i]), boxwex=0.5); mtext(sprintf("%.1f",b$stats[3]),side=3,at=b$stats[3],line=-10)})
YOu can check ?boxplot()
A.K.
----- Original Message -----
From: "shanthimulinti at gmail.com" <shanthimulinti at gmail.com>
To: smartpink111 at yahoo.com
Cc:
Sent: Thursday, March 21, 2013 4:05 PM
Subject: Re: Displaying median value over the horizontal(median)line in the boxplot
Here is what I am doing
my=read.csv("test.csv")
apply(my,2,median,na.rm=TRUE)
b<-boxplot(my,range=0, pars=list(boxwex=0.6))
After this I am not sure how to automatically list the median in each of the two boxplots
test.csv has
columnA columnB
1 1
2 2
3 3
4 4
5 5
6 6
7 7
Finally how do I control the output. My actual data has a median value of 7.642552 but I only want it to be displayed as 7.6.
Thank you so much for your help. I am very sorry for troubling you but I am very very new to this programming and to R as you can see.
<quote author='arun kirshna'>
Hi,
Lines1<-readLines(textConnection("Column1 -1,2,3,4,5,6,6,7
COlumn2- 3,4,5,6,7,8,8
Column3-- 45,66,7,8,89,
COlumn4-5,6,7,7,8,9
Column5 -5,6,7,8,8"))
vec1<-unlist(strsplit(Lines1,"-"))
dat1<-as.data.frame(t(read.table(text=vec1[grepl(",",vec1)],sep=",",fill=TRUE)))
row.names(dat1)<-NULL
colnames(dat1)<-tolower(gsub(" $","",vec1[grepl("^C",vec1)]))
dat1
# column1 column2 column3 column4 column5
#1 1 3 45 5 5
#2 2 4 66 6 6
#3 3 5 7 7 7
#4 4 6 8 7 8
#5 5 7 89 8 8
#6 6 8 NA 9 NA
#7 6 8 NA NA NA
#8 7 NA NA NA NA
apply(dat1,2,median,na.rm=TRUE)
#column1 column2 column3 column4 column5
# 4.5 6.0 45.0 7.0 7.0
#to save it as a pdf
pdf("Shanthiboxplot.pdf")
par(mfrow=c(3,2))
lapply(dat1,function(x)
{b<-boxplot(x,range=0,horizontal=TRUE);mtext(b$stats[3],side=3,at=b$stats[3],line=-8)})
dev.off()
#to just print it on screen
par(mfrow=c(3,2))# you can change this according to your need
lapply(dat1,function(x)
{b<-boxplot(x,range=0,horizontal=TRUE);mtext(b$stats[3],side=3,at=b$stats[3],line=-8)})
A.K.
</quote>
Quoted from:
http://r.789695.n4.nabble.com/Displaying-median-value-over-the-horizontal-median-line-in-the-boxplot-tp4661854p4661935.html
More information about the R-help
mailing list