[R] Distribution plus background fitting
Richard Longland
rlongland at gmail.com
Mon Mar 11 11:40:28 CET 2013
Hi All,
I apologise if this question has been answered before, but my background is
a little different from most people using R, and the language we use seems
to be different! I am trying to analyse some nuclear physics data, which
consists of an ensemble of "energy" readings in a detector that, when
binned, form a number of Gaussian shaped peaks superimposed on a varying
background (see attached pdf image).
In my field, the common practice is to bin these readings into a histogram,
and then use a variety of chi-squared fitting techniques to fit a linear
background and Gaussian directly to the binned counts to obtain a position
and area under a peak. I understand that this is poor practice, especially
given my rather low counting rate, so I have been attempting to fit the raw
data with the fitdistrplus package (linked to from
http://www.r-bloggers.com/fitting-distributions-with-r).
I can fit an isolated Gaussian peak successfully using these methods (the
central peak in my attached image). However, I cannot find a suitable
distribution to account for the background in the peaks to the left of this
(which I assume to vary linearly under each peak for now). Is this possible
with usual distribution fitting methods, or should I stick to fitting the
binned data (possibly including some interval censoring corrections)?
Thank in advance for the help,
Richard Longland
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