[R] robustbase adjbox segfault - memory not mapped
Martin Maechler
maechler at stat.math.ethz.ch
Mon Mar 4 17:49:18 CET 2013
>>>>> "B" == Baan <baanbapat at gmail.com>
>>>>> on Mon, 4 Mar 2013 15:02:02 +0530 writes:
B> Hi, I encountered a segfault, memory not mapped error
B> when using adjbox in robustbase. In trying to recreate
B> the issue I found that the error occurs only for large
B> sample size. Here is the code.
>> require(robustbase)
B> Loading required package: robustbase
>> x <- rnorm(10)
>> y <- rep(1, 10)
>> adjbox(x ~ y) ## gives a plot
>> x <- rnorm(10000)
>> y <- rep(1, 10000)
>> adjbox(x ~ y) ## gives a plot
>> x <- rnorm(100000)
>> y <- rep(1, 100000)
>> adjbox(x ~ y)
B> *** caught segfault ***
B> address 0xfffffffcc47af530, cause 'memory not mapped'
B> Traceback:
B> 1: .C(mc_C, x, n, eps = eps, iter = c.iter, medc = double(1))
B> 2: mcComp(x, doReflect, eps1 = eps1, eps2 = eps2, maxit = maxit,
B> trace.lev = trace.lev)
B> 3: mc.default(x, ..., na.rm = TRUE)
B> 4: mc(x, ..., na.rm = TRUE)
B> 5: adjboxStats(unclass(groups[[i]]), coef = range, doReflect = doReflect)
B> 6: adjbox.default(split(mf[[response]], mf[-response]), ...)
B> 7: adjbox(split(mf[[response]], mf[-response]), ...)
B> 8: adjbox.formula(x ~ y)
B> 9: adjbox(x ~ y)
Indeed, I (as maintainer of robustbase) can reproduce the
segfault.... *even* though you did not specify the random seed...
So this should be fixed ... hopefully within a week or so,
but I am not promising anything, given my busy schedule!
Martin Maechler,
ETH Zurich
[................]
B> My setup details:
B> R --version
B> R version 2.15.2 (2012-10-26) -- "Trick or Treat"
B> Package: robustbase
B> Version: 0.9-5
B> Date: 2012-03-01
B> Packaged: 2013-03-01 16:34:03 UTC; maechler
B> NeedsCompilation: yes
B> Repository: CRAN
B> Date/Publication: 2013-03-01 18:31:33
B> Built: R 2.15.2; x86_64-pc-linux-gnu; 2013-03-04 05:54:20
B> UTC; unix
B> Platform: x86_64-pc-linux-gnu (64-bit)
B> uname -a
B> Linux R 2.6.32-5-amd64 #1 SMP Mon Feb 25 00:26:11 UTC 2013 x86_64 GNU/Linux
B> Debian squeeze
B> Could someone pls help.
B> Regards
B> Baan
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