[R] Inserting color into an irregular grid comprised of polygons

Mon Dec 23 20:05:49 CET 2013

Recode val into a set of integers equal to the number of color
levels you want and then use heat.colors(), terrain.colors(), or
a similar function to define a vector of continuous colors.

# cut makes it easy to split up the data but it creates a factor
# and loses the matrix dimensions so we have to convert back.

cv <- matrix(as.integer(cut(vals, breaks=10)), dim(vals))
pal <- heat.colors(10)

Then use

polygon(x=x, y=y, border=NA, col=pal[cv[k, j]])

Note: border=NA, not NULL

David Carlson

-----Original Message-----
From: r-help-bounces at r-project.org
[mailto:r-help-bounces at r-project.org] On Behalf Of Morway, Eric
Sent: Monday, December 23, 2013 12:11 PM
To: R mailing list
Subject: [R] Inserting color into an irregular grid comprised of
polygons

useRs,

The example code below is an attempt to plot some spatial data
that is
associated with an irregularly spaced grid.  The last thing I
hope to do
with this example is assign the color of each polygon generated
in the
nested for loop based on the value contained in "vals".  The R
code I'm
seeking help with appears at the end of the example code below.
How would
one assign a color to the polygon at position [j,k] that is
appropriately
scaled to the total range of "vals"?  The comment appearing
before the last
line of commented-out code in the example below provides a
little more
information.  Thanks, Eric

## Example R Code
library(gsubfn)  #uses paste0 func

x.space <-
c(0.13833334,0.27666667,0.27666667,0.27666667,0.13833334,0.13833
334,0.13833334,0.13833334,0.13833334,0.13833334,0.13833334,0.138
33334,0.13833334,0.13833334,0.13833334,0.13833334,0.13833334,0.1
3833334,0.13833334,0.13833334,0.13833334,0.13833334,0.13833334,0
.13833334,0.13833334,0.13833334,0.13833334,0.13833334,0.13833334
,0.13833334,0.13833334,0.13833334,0.13833334,0.13833334,0.138333
34,0.13833334,0.27666667,0.27666667,0.27666667,0.27666667,0.2766
6667,0.27666667,0.27666667,0.415,0.415,0.415,0.415,0.415,0.415,0
.415,
0.27666667, 0.27666667)
z.space <-
c(0.23503518,0.0993,0.0993,0.0993,0.0993,0.0993,0.0993,0.0993,0.
0993,0.0993,0.0993,0.0993,0.0993,0.0993,0.050285053,0.04901495,0
.0993,0.042104937,0.057195064,0.059790898,0.0395091,0.03392482,0
.022215653,0.043159526,0.048876755,0.050423246,0.049547195,0.049
752805,0.050217632,0.049082365,0.0993,0.046798017,0.052501984,0.
052228954,0.047071047,0.052899394,0.046400607,0.06309083,0.03620
9174,0.0993,0.050150216,0.04914978,0.055581152,0.043718845,0.099
3,0.0993,0.0993,0.0993,0.0993,0.1986,0.1986,0.1986,0.1986,0.1986
,0.3972,0.3972,0.3972,0.4965,0.3972,0.3972,0.3972,0.3972,0.3972,
0.3972,0.3972,0.3972,0.4965,0.4333665,0.44272622,0.5141073,0.595
8,0.4965,0.3972,0.3972,0.3972,0.3972,0.3972,0.3972,0.3972,0.3972
,0.3972,0.3972,0.3972,0.3972,0.3972,0.3972,0.3972,0.3972,0.3972,
0.3972,0.1986,0.1986)

x.range <- c(0,sum(x.space))
z.range <- c(0,sum(z.space))
z.sum <- sum(z.space)

vals <-
matrix(c(0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000
E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00
,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.0
00E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+
00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0
.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000
E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00
,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.0
00E+00,0.684E+01,

0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.00
0E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+0
0,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.
000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E
+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,
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684E+01,

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+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,
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712E+01,

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8E+01,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+00,0.000E+0
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649E+01,

0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.64
9E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+0
1,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.
649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E
+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,
0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.64
9E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+0
1,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.649E+01,0.
649E+01),
                 nrow = length(z.space), ncol = length(x.space),
byrow =
TRUE,
                 dimnames =
list(paste0("R",seq(1,length(z.space),by=1)),

paste0("C",seq(1,length(x.space),by=1))))

plot(1,1, col="white" ,xlim=x.range, ylim=z.range, xaxs="i",
yaxs="i",
las=1, xlab="X", ylab="Z")
for (k in (1:length(z.space))){
  for (j in (1:length(x.space))){

    if (j==1){
      x = c(0, 0, x.space[j], x.space[j])
    } else {
      x = c(sum(x.space[1:(j-1)]), sum(x.space[1:(j-1)]),
sum(x.space[1:j]), sum(x.space[1:j]))
    }

    if (k==1){
      y = c(z.sum, z.sum - sum(z.space[1]), z.sum -
sum(z.space[1]), z.sum)
    } else {
      y = c(z.sum - sum(z.space[1:(k-1)]),  z.sum -
sum(z.space[1:k]),
z.sum - sum(z.space[1:k]), z.sum - sum(z.space[1:(k-1)]))
    }

    #This shows the grid cells
    polygon(x=x, y=y, border="black")

    #Instead of plotting the grid cell boundaries, I'd like to
plot a
colored polygon that is borderless
    #Need help assigning a color that is within the total range
of "vals"
and is based on vals[j,k]
    #polygon(x=x, y=y, border=NULL, col= vals[j,k])

  }
}

	[[alternative HTML version deleted]]

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