[R] BRugs: error when compiling model

Uwe Ligges ligges at statistik.tu-dortmund.de
Mon Aug 5 17:34:58 CEST 2013


Please specify a reproducible example, i.e. what you did exactly, all 
the way before the error message.

Best,
Uwe Ligges


On 05.08.2013 17:06, Nash, Charles T C wrote:
> Using:
>
> R version 3.0.1 (2013-05-16) -- "Good Sport"
> Platform: x86_64-w64-mingw32/x64 (64-bit)
> OpenBUGS version 3.2.2 rev 1063
> BRugs version 0.8-1
>
>
> Hi there,
>
> When using the modelCompile() function in BRugs package I get the following error:
>
> Error in handleRes(res) : NA
> In addition: Warning message:
> running command '"C:/Program Files/R/R-3.0.1/library/BRugs/exec/BugsHelper.exe" "C:/Users/cnash/AppData/Local/Temp/RtmpMlFBjk" "C:/Users/cnash/AppData/Local/Temp/RtmpMlFBjk/trash" "filef441bdb5e62.bug" "C:/Users/cnash/AppData/Local/Temp/RtmpMlFBjk/cmds.txt" "1"' had status 5
>
> The model is as follows:
>
> MODEL {
> for (i in 1:7932) {
>                       for (j in 1:2) {
>                                         Y[i,j] ~ dpois(mu[i, j])
>                                         log(mu[i, j])    <-  alpha[j] + log(cars[i])  + V[i,j]   + U[i]
>
>                                         V[i,j] ~   dnorm(0, tau.un[j])
>
>                                          }
>                               }
>
> U[1:7932] ~ car.normal(adj[], weights[], num[], tau.spatial)
> for (k in 1:sumNumNeigh) {weights[k]<-1}
>
>
> for(j in 1:2){
>                alpha[j] ~ dnorm( 0, 0.0001)
>                tau.un[j] ~ dgamma(0.5, 0.0005)
>                sigma.tau[j] <- 1/tau.un[j]
>                     }
>
> tau.spatial ~ dgamma(0.5, 0.0005)
> sigma.spatial <- 1/tau.spatial
>
> }
>
> There are no NA's in my data, and the model compiles in Openbugs. Could it be an issue with 64bit R?
>
> Thanks!
>
> Charlie Nash
>
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> and provide commented, minimal, self-contained, reproducible code.
>



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