[R] CCA report "species environment correlation"

[Gavin Simpson]

On Fri, 2013-04-12 at 11:00 -0700, SRuhl wrote:
> Hi everyone,
> I did a CCA with R in the vegan package and got all the outputs I need/want
> to report except for one, that is the "species environment correlation"
> values. I only know of them because of one of the sources I read up on about
> CCAs reported it and I have the suspicion that it´s a value reported when
> you do a CCA in SPSS (which I have never done) and that just doesnßt come up
> in R.
> Can anyone tell me how to find it or calculate it myself? Do I need to run
> posthoc stats or additional tests on my results?
> Thanks in advance!

See `?spenvcor` with vegan loaded. Pass it your CCA model object.

G

> --
> View this message in context: http://r.789695.n4.nabble.com/CCA-report-species-environment-correlation-tp4664089.html
> Sent from the R help mailing list archive at Nabble.com.
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

-- 
%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%
 Dr. Gavin Simpson             [t] +44 (0)20 7679 0522
 ECRC, UCL Geography,          [f] +44 (0)20 7679 0565
 Pearson Building,             [e] gavin.simpsonATNOSPAMucl.ac.uk
 Gower Street, London          [w] http://www.ucl.ac.uk/~ucfagls/
 UK. WC1E 6BT.                 [w] http://www.freshwaters.org.uk
%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%