[R] memory use problem.
Prof Brian Ripley
ripley at stats.ox.ac.uk
Mon Sep 10 19:27:42 CEST 2012
On 10/09/2012 16:13, chrisk wrote:
> I having issues with my memory size in R for Windows. I have implemented the
> 3gb switch for Windows 7 32 bit with 8gb of memory, only 4gb is available
> for use due to 32 bit limitations. 512Mb is taken by the shared video card,
> the memory limit is 2559mb yet I cannot use more than 1.5 gb of memory. I
> have searched eveywhere and cannot find any resolution to my issue.
?'Memory-limits' told you why
It is not normally possible to allocate as much as 2Gb to a single
vector in a 32-bit build of R even on 64-bit Windows because of
preallocations by Windows in the middle of the address space.
'Search eveywhere' seems not to have included the R help ... I agree
that Microsoft is very coy about what it does to your address space.
>
>
>> memory.limit()
> [1] 2559
>> memory.size()
> [1] 399.47
>> a = aov(data$cv~(data$Lo+data$La+data$Mo+data$Co))
> Error: cannot allocate vector of size 1.4 Gb
>> gc()
> used (Mb) gc trigger (Mb) max used (Mb)
> Ncells 726003 19.4 2251281 60.2 1677683 44.8
> Vcells 37249684 284.2 93398451 712.6 93388743 712.5
>> (1024 * 14) + 44.8 + 712.5
> [1] 15093.3
>>
>
> Thank you,
>
> Chris
>
--
Brian D. Ripley, ripley at stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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