[R] SPACECAP error "subscript out of bounds"

[jmosley]

CENTERS.csv <http://r.789695.n4.nabble.com/file/n4647606/CENTERS.csv>  Hello
all, 

I'm trying to run SPACECAP. A couple of days ago I ran it with a centers
file with 300 GPS points, now I'm trying to run it with 2250, but I get this
error:

Error in NN[i, 1:length(od)] <- od : subscript out of bounds

I tried running SPACECAP with 1000 and 2000 points, but it still is not
working. I've updated R, I reinstalled and then reloaded SPACECAP, checked
the excel spreadsheets, I've looked everywhere for some answer, but I've
found nothing but an old thread dated 2011.
(http://r.789695.n4.nabble.com/Error-message-for-csv-file-td3807651.html)

I've attached my file with the 2250 GPS points, points were created in GME
with the random points generator tool. As for the file, I'll try and answer
some of the questions that the people posed to the user in 2011:

str(NN)--str(centers) = > str(centers)
'data.frame':   2250 obs. of  3 variables:
 $ X_COORD: num  353744 349686 350758 351545 351545 ...
 $ Y_COORD: num  8318707 8319311 8317761 8318474 8319172 ...
 $ HABITAT: int  1 1 1 1 1 1 1 1 1 1 ...

dim(NN) --dim(centers)
> dim(centers)
[1] 2250    3

length(od) --length(centers) [not entirely sure if I'm supposed to be
finding this length or the length of something else]
> length(centers)
[1] 3

and where it comes from--my computer. It's a CSV file, points from GME
random point generator. Nothing special.

And, additionally, if I try to run the commands as given in the forum
(dim(NN)), I get NN is not found/od is not found. 



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