[R] data frame: adding columns from data and file title
arun
smartpink111 at yahoo.com
Wed Nov 28 13:40:36 CET 2012
Hi,
TRy this:
dat1 <- read.table(text="
Date_ Time_ Speed Course Type_ Distance
30/03/2012 11:15:05 108 121 -2 0
30/03/2012 11:15:06 0 79 0 0
30/03/2012 11:15:07 0 76 0 1
30/03/2012 11:15:08 0 86 0 2
30/03/2012 11:15:09 0 77 0 3
", header = TRUE, stringsAsFactors = FALSE)
fileN <- "G7_pig328_unit328_Site141_30MAR2012_RNo4_SitNo1.csv"
dat1$cDistance<-cumsum(dat1$Distance)
dat1$Group<-as.numeric(unlist(strsplit(gsub("^\\D+(\\d+)\\D+(\\d+).*","\\1 \\2",fileN)," ")))[1]
dat1$BIRD<-as.numeric(unlist(strsplit(gsub("^\\D+(\\d+)\\D+(\\d+).*","\\1 \\2",fileN)," ")))[2]
dat1
A.K.
----- Original Message -----
From: jgui001 <j.guilbert at auckland.ac.nz>
To: r-help at r-project.org
Cc:
Sent: Wednesday, November 28, 2012 4:33 AM
Subject: [R] data frame: adding columns from data and file title
Data processing”
I have a large number of csv files from animal tracks that look like this:
Date_ Time_ Speed
Course Type_ Distance
30/03/2012 11:15:05 108
121 -2
0
30/03/2012 11:15:06 0
79 0 0
30/03/2012 11:15:07 0
76 0 1
30/03/2012 11:15:08 0
86 0 2
30/03/2012 11:15:09 0
77 0 3
Each file has a name like this
“G7_pig328_unit328_Site141_30MAR2012_RNo4_SitNo1.csv”
To automate the processing I would like to
1. Add on various columns calculated from within the data frame e.g.
cumulative distance traveled (cDistance) by Summing the distance column from
[1 :n] for each row
2 Add columns derived from the file name so when I merge all the files
together I know what observation corresponds to which group and bird etc.
For example G7 stands for group 7, pig328 is pigeon328:
The file look the same with but with these columns (plus others) added
cDistance Group BIRD
0 7 328
0 7 328
1 7 328
3 7 328
6 7 328
I was thinking a function like this for cDistance (if I can get it to work)
cdistamce <-funtion(x){
i = 1
j=nrow(temp1.df)
while(i<=j,ifelse(i=1,"Distance[i]",Sum("Distance"))
i=i+1
}
But hit a brick wall and I have no idea about adding columns from the name.
Am I on the right track with the first one and any ideas, coz I can't brain
today I have the dumb!?
Cheers
Josh
--
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