[R] error data frame

[Pascal Oettli]

Hello,

Your function is a supplementary material. I tried to apply this 
function using the example provided and it failed. I use R version 
2.15.2 (2012-10-26).

Regards,
Pascal


Le 15/11/2012 15:36, Stendera, Sonja, Dr. a écrit :
> Thanks, but sorry, that's all I have. I ran the script with the functions provided by Baker & King, installed the package, improrted the data files, but then, when I try this formula:
> Fish89TiTAN <- titan(Fish89PCA, Fish89Abund, minsplt=5,
>> + numprm=250, nboot=500, boot=TRUE, deviance=TRUE) (Baker & King)
> I get the error.
> Best, Sonja
> ________________________________________
> Von: Pascal Oettli [kridox at ymail.com]
> Gesendet: Donnerstag, 15. November 2012 03:26
> An: Sonja69
> Cc: r-help at r-project.org
> Betreff: Re: [R] error data frame
>
> Hello,
>
> You don't provide a reproducible example. And, also, the package the
> "titan" function comes from. The function I found doesn't use the
> options you used in yours.
>
> Regards,
> Pascal
>
>
> Le 14/11/2012 23:10, Sonja69 a écrit :
>> Hallo everybody!
>> I am trying to perform a TiTAN (Baker & King 2010) analysis with R 2.14.1. I
>> have come that far:
>>
>> h89Abund <- read.csv("Fish89Abund.csv")
>>> names (Fish89Abund)
>>    [1] "StationCode"                "Abramisbrama"
>> "Alburnoidesbipunctatus"     "Alburnusalburnus"
>>    [5] "Ameiurusmelas"
>>> Fish89PCA <-read.csv("Fish89PCA.csv")
>>> names (Fish89PCA)
>> [1] "StationCode" "PCA1"
>>> # Check data (1:X rows, e.g. 1:3,=1.-3.row or else)
>>> Fish89PCA [1:3,]
>>     StationCode       PCA1
>> 1       DE582 -1.5592527
>> 2        DE38  0.3530658
>> 3  FR02116570  2.8057854
>>>
>>> names (Fish89PCA)
>> [1] "StationCode" "PCA1"
>>> Fish89TiTAN <- titan(Fish89PCA, Fish89Abund, minsplt=5,
>> + numprm=250, nboot=500, boot=TRUE, deviance=TRUE)
>> [1] "Taxa frequency screen complete"
>> [1] "Function definition complete"
>>
>> Error in is.data.frame(x) : subscript out of bounds
>>
>> This essror mesage is killing me. I checked the data tables and the
>> internet, but nowhere any satisfying answer.
>> Can anybody help me please? Thanks in advance!!
>>
>>
>>
>>
>> --
>> View this message in context: http://r.789695.n4.nabble.com/error-data-frame-tp4649491.html
>> Sent from the R help mailing list archive at Nabble.com.
>>
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>>
>