[R] How to generate a random field with truncated marginal distributions?
Ben Bolker
bbolker at gmail.com
Mon Nov 12 20:49:10 CET 2012
On 12-11-12 02:05 PM, Mark Leeds wrote:
> Hi: Not sure if totally relevant because I didn't read it but it might
> help or atleast
> be of interest.
>
> http://journal.r-project.org/archive/2010-1/RJournal_2010-1_Wilhelm+Manjunath.pdf
This definitely looks relevant. The critical question will be how
large a sample the original questioner needs to generate. If it's not
too big, then they can just construct their own correlation matrix, and
go from there.
Ben
>
>
> On Mon, Nov 12, 2012 at 12:15 PM, Ben Bolker <bbolker at gmail.com
> <mailto:bbolker at gmail.com>> wrote:
>
> Zhenglei Gao <zhenglei.gao <at> bayer.com <http://bayer.com>> writes:
>
> > I have asked the same question on stackoverflow but did not get a
> > satisfying answer.
>
> > I am trying to simulate a lognormal spatial random field but I need
> > the simulated value in a certain range. So I need some easy to use
> > functions to generate a truncated Gaussian field to start with. To
> > be specific, I need a function like GaussRF from the RandomFields
> > package or grf from the geoR package to generate a random field, but
> > I need the generated field to have a truncated marginal
> > distributions and a correlation structure with a prescribed
> > range. Is there an R package or functions which can do this? If
> > there is no availabe read-to-use functions or packages,is it
> > possible that I write my own very easily?
>
> As I suggested on Stack Overflow, I don't think this is a simple
> question: you can pick values according to a normal distribution and
> then squash them into a truncated normal distribution: something like
>
> olddata <- GaussRF(...)
> library(truncnorm)
> newdata <- qtruncnorm(pnorm(olddata))
>
> However, this may very well modify the range; I don't know.
> If I were you, I would try it and see if you can live with the
> results. If not, ask on http://stats.stackexchange.com
>
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