[R] “For” calculation is so slow
Petr PIKAL
petr.pikal at precheza.cz
Wed May 23 09:30:19 CEST 2012
>
> I'm not sure what you are trying to prove with that example - the
loopless
> versions are massively faster, no?
In some languages loops are integral part of programming habits. In R you
can many things do with whole objects without looping - vectorisation
approach. See R-Inferno from Patrick Burns - circle 3.
>
> I don't disagree that loops are sometimes unavoidable, and I suppose
> sometimes loops can be faster when the non-loop version e.g. breaks your
Hm. I am not sure what it has to do with memory budget.
> memory budget, or performs tons of needless computations. But I think
> avoiding for loops whenever you can is a good rule of thumb in R coding.
I constantly use loops when I create pictures of dataframe values.
This
library(ggplot2)
pdf("konc.pdf", 8,8, useDingbats=F)
for (i in columns) {
p<-ggplot(df.name, aes(x=x.value, y=df.name[,i], colour=other.column))
print(p+geom_smooth(method="lm")+geom_point(aes(shape=some.factor,
size=5))+scale_y_continuous(names(df.name)[i]))
}
dev.off()
can easily create pdf file with many plots of selected columns against one
column. I know that I could use lapply, but the loop seems to me clean and
efficient even when I plot several hundreds graphs.
Regards
Petr
>
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