[R] Re : "gplots" packages does not work

[Pascal Oettli]

Hi Fernando,

You have to reinstall package 'bitops' too.

Regards,
Pascal



----- Mail original -----
De : Fernando Pistón <fpiston at gmail.com>
À : r-help at r-project.org
Cc : 
Envoyé le : Mardi 13 mars 2012 16h10
Objet : [R] "gplots" packages does not work

I had installed de "gplots" package and then I loaded the library but the
package did not work.  I recieved a message like this:

> install.packages("gplots", dependencies = TRUE)
Installing package(s) into
‘/home/fpiston/R/x86_64-pc-linux-gnu-library/2.14’
(as ‘lib’ is unspecified)
--- Please select a CRAN mirror for use in this session ---
Loading Tcl/Tk interface ... done
trying URL 'http://cran.es.r-project.org/src/contrib/gplots_2.10.1.tar.gz'
Content type 'application/x-gzip' length 226290 bytes (220 Kb)
opened URL
==================================================
downloaded 220 Kb

* installing *source* package ‘gplots’ ...
** package ‘gplots’ successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
Error : package ‘caTools’ was built before R 2.10.0: please re-install it
ERROR: lazy loading failed for package ‘gplots’
* removing ‘/home/fpiston/R/x86_64-pc-linux-gnu-library/2.14/gplots’

The downloaded packages are in
‘/tmp/Rtmp2ooBQr/downloaded_packages’
Warning message:
In install.packages("gplots", dependencies = TRUE) :
  installation of package ‘gplots’ had non-zero exit status
> install.packages("caTools", dependencies = TRUE)
Installing package(s) into
‘/home/fpiston/R/x86_64-pc-linux-gnu-library/2.14’
(as ‘lib’ is unspecified)
trying URL 'http://cran.es.r-project.org/src/contrib/caTools_1.12.tar.gz'
Content type 'application/x-gzip' length 61894 bytes (60 Kb)
opened URL
==================================================
downloaded 60 Kb

* installing *source* package ‘caTools’ ...
** Creating default NAMESPACE file
** libs
g++ -I/usr/share/R/include      -fpic  -O3 -pipe  -g -c Gif2R.cpp -o Gif2R.o
g++ -I/usr/share/R/include      -fpic  -O3 -pipe  -g -c GifTools.cpp -o
GifTools.o
gcc -std=gnu99 -I/usr/share/R/include      -fpic  -O3 -pipe  -g -c
runfunc.c -o runfunc.o
g++ -shared -o caTools.so Gif2R.o GifTools.o runfunc.o -L/usr/lib64/R/lib
-lR
installing to /home/fpiston/R/x86_64-pc-linux-gnu-library/2.14/caTools/libs
** R
** preparing package for lazy loading
Error : package ‘bitops’ was built before R 2.10.0: please re-install it
ERROR: lazy loading failed for package ‘caTools’
* removing ‘/home/fpiston/R/x86_64-pc-linux-gnu-library/2.14/caTools’

The downloaded packages are in
‘/tmp/Rtmp2ooBQr/downloaded_packages’
Warning message:
In install.packages("caTools", dependencies = TRUE) :
  installation of package ‘caTools’ had non-zero exit status
> library(caTools, pos=4)
Error: package ‘caTools’ was built before R 2.10.0: please re-install it
> library(gplots, pos=4)
Loading required package: gtools
Loading required package: gdata

Attaching package: ‘gdata’

The following object(s) are masked from ‘package:stats’:

    nobs

The following object(s) are masked from ‘package:utils’:

    object.size

Loading required package: caTools
Error: package ‘caTools’ was built before R 2.10.0: please re-install it



-- 
Fernando Piston Piston
fpiston at gmail.com

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