[R] reading HDF5 or H5 files

uday uday_143_4u at hotmail.com
Fri Mar 9 16:41:24 CET 2012


I would like to read hdf5 or h5 files in R . 
I found two packages hdf5 and h5r , but in both packages they have
information how to get attribute from data. 
In my case I would like see what kind of parameters are saved in every file. 
I have tried 
h5 <- hdf5load("GOSATTFTS20090601_02C02SV0002R101202000F0.h5", 
         load = TRUE, verbosity = 0, tidy = FALSE)
 ls() # list available data
ls()
 [1] "Data"          "Gcan"          "Global"        "aet"          
"ancillary"    
 [6] "driver"        "evalStats"     "gpp"           "h5"            "h5t"          
[11] "i"             "nam"           "nee"           "obs"           "r.1"          
[16] "r.2"           "r.3"           "r.4"           "r.5"           "r.6"          
[21] "scanAttribute" "swc1"          "swc2"          "t"             "ter"          
[26] "x"             "y"             "z"      

but these are major classes and I would like see the names of attributes
which are stored in this major groups? 
how to deal with these major parameters ? 




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