[R] error in R CMD build when editing c function in R package
Prof Brian Ripley
ripley at stats.ox.ac.uk
Tue Jan 31 09:30:04 CET 2012
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On 31/01/2012 06:21, moli wrote:
> I have modified a C function in the `phmm` package. Now I want to rebuild the
> package, but the following error occurred. How can I fix the error?
>
>
> $ cd ~/Desktop/phmmw
> $ R CMD build phmm
> * checking for file ‘phmm/DESCRIPTION’ ... OK
> * preparing ‘phmm’:
> * checking DESCRIPTION meta-information ... OK
> * cleaning src
> * installing the package to re-build vignettes
> -----------------------------------
> * installing *source* package ‘phmm’ ...
> ** libs
> *** arch - x86_64
> gcc-4.2 -arch x86_64 -std=gnu99
> -I/Library/Frameworks/R.framework/Resources/include
> -I/Library/Frameworks/R.framework/Resources/include/x86_64
> -I/usr/local/include -fPIC -g -O2 -c arms.c -o arms.o
> make: gcc-4.2: No such file or directory
> make: *** [arms.o] Error 1
> ERROR: compilation failed for package ‘phmm’
> * removing
> ‘/private/var/folders/r0/9qv15p6j59j6jtfq775k6j380000gn/T/RtmpIPgvDE/Rinst48317ea7/phmm’
> -----------------------------------
> ERROR: package installation failed
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Please so.
--
Brian D. Ripley, ripley at stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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