[R] Compiling R code to native code?
Bert Gunter
gunter.berton at gene.com
Sun Jan 29 02:47:27 CET 2012
Facts:
1. R does not by default compile bytecode. It uses a read-parse-eval
cycle as described in the R Language Manual.
2. However, as of 2.14.0 (anyway) there is a "compiler" package that
is shipped as part of the standard distribution. Written by Luke
Tierney and his graduate student minions, it is described here:
http://www.divms.uiowa.edu/~luke/R/compiler/compiler.pdf
As usual, it can result in considerable speedup, though vectorization
is still a good strategy when possible.
To be clear, Jeff's original reply is correct -- R is interpreted, not compiled.
Cheers,
Bert
On Sat, Jan 28, 2012 at 5:01 PM, Jeff Newmiller
<jdnewmil at dcn.davis.ca.us> wrote:
> Nope. Most users get speed by using vectorized calculations. If you have already identified how to get correct answers, the next step is something like Rcpp or linking to a shared library written in your language of choice.
>
> But seriously, vectorizing is enough for most applications, and making sure the answer is right doesn't usually require compiled code.
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> Sent from my phone. Please excuse my brevity.
>
> Gregory Propf <gregorypropf at yahoo.com> wrote:
>
>>Simple question: is there a way to compile R scripts to native code?
>>�If not is there anything else that might improve speed? �I'm not even
>>sure that R compiles internally to byte code or not. �I assume it does
>>since all modern languages seem to do this. �Maybe there's a JIT
>>compiler? �Yes, I have searched Google and get lots of stuff that's
>>seems confusing. �I just want to know what packages to install and how
>>to use them to generate binaries if they exist.
>> [[alternative HTML version deleted]]
>>
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>
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--
Bert Gunter
Genentech Nonclinical Biostatistics
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Phone: 467-7374
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