[R] update.formula has 512 char buffer?
Duncan Murdoch
murdoch.duncan at gmail.com
Tue Feb 28 21:28:01 CET 2012
On 28/02/2012 2:46 PM, Bert Gunter wrote:
> Your code seems to be screwed up. There are no (small) size
> limitations on formulas (afaik).
>
> The following worked fine for me:
>
> x<- paste("x",1:100,sep="",collapse = " + ")
> part1<- paste("y",x,sep=" ~ ")
> part2<- paste("f",1:50, sep="",collapse = " + ")
> fml<- formula(paste(part1,part2,sep=" | "))
I think the problem is in R, not in what Chris did. It seems to be in
update.formula, or terms.formula, or some related function.
I'll try to track it down.
Duncan
> Cheers,
> Bert
>
> On Tue, Feb 28, 2012 at 11:11 AM, Chris Hane
> <christopher.a.hane at gmail.com> wrote:
> > Hello,
> >
> > I am trying to "paste" together a formula to use in the mob function of
> > party. This means the formula will be of the form y ~ x1+ ...+xM | z1+..zN.
> >
> > I am doing some preliminary fits of y ~ x1+ ...+xM, then want to add the
> > conditional part of the equation using update().
> >
> > Here's the test code:
> > var1<- 1:78
> > x1<- paste("x", var1, sep="")
> > f1<- paste("f", var1[1:10], sep="")
> >
> > # use first 77 variables
> > fmla<- as.formula( paste("y ~ ", paste(x1[1:77], collapse=" + ", sep=""),
> > sep=""))
> > fmla2<- update(fmla, paste(". ~ . | ", paste(f1, collapse= " + "), sep=""))
> >
> > # CHANGE x to all 78 variables
> > fmla<- as.formula( paste("y ~ ", paste(x1, collapse=" + ", sep=""),
> > sep=""))
> > fmla2<- update(fmla, paste(". ~ . | ", paste(f1, collapse= " + "), sep=""))
> >
> > I have run this in Windows and Linux (64 bit) and both fail when using all
> > 78 terms (and anything more than 78 terms). The error message contains
> > Error in parse(text = x) : :1:514: unexpected ')'.
> >
> > Changing the length of the names of the x variables will break the update()
> > with fewer variables, but always with an error referring to just more than
> > 512 characters. There is nothing special about 77 or 78 variables here; I
> > want to do this with hundreds of variables.
> >
> > Is there a workaround to this?
> >
> > [[alternative HTML version deleted]]
> >
> > ______________________________________________
> > R-help at r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
>
>
>
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