[R] Accessing the (first or more) principal component with princomp or prcomp
Bert Gunter
gunter.berton at gene.com
Thu Aug 23 06:42:57 CEST 2012
How about reading the Help files?
-- Bert
On Wed, Aug 22, 2012 at 8:34 PM, jpm miao <miaojpm at gmail.com> wrote:
> Hi ,
>
> To my knowledge, there're two functions that can do principal component
> analysis, princomp and prcomp.
>
> I don't really know the difference; the only thing I know is that when
> the sample size < number of variable, only prcomp will work. Could someone
> tell me the difference or where I can find easy-to-read reference?
>
> To access the first PC using princomp:
> Mpca<-princomp(M, cor=T)
> Mpca$scores[,1]
>
> How can I access the first PC using prcomp?
> Mpca<-prcomp(M)
>
> Is there an option for "cor=T"?
> In case where both functions work, will the results be the same?
>
> Thanks,
>
> Miao
>
> [[alternative HTML version deleted]]
>
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--
Bert Gunter
Genentech Nonclinical Biostatistics
Internal Contact Info:
Phone: 467-7374
Website:
http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm
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