[R] how to remove NA/NaN/Inf in a matrix??

[Ken]

Try:
library(Hmisc)
?na.delete
  Ken Hutchison 

On Sep 11, 2554 BE, at 5:38 AM, anand m t <anandrox05 at gmail.com> wrote:

> Hi all..
> I'm very new R, and i'm analyzing microarray data using Bioconductor..
> Recently i was given microarray data to analyze. The problem is whenever i
> run MAS5 presence calls algorithm,
> it throws an error saying NA/NaN/Inf in foreign function. How do i remove
> such  NA/NaN/Inf's ??
> I tried na.omit(dataframe)  but stil problem exists.
> 
> dimension of matrix (data) is 35556     7.
> 
>> data.mas5calls=mas5calls(data)
> Getting probe level data...
> Computing p-values
> Error in FUN(1:6[[1L]], ...) :
>  NA/NaN/Inf in foreign function call (arg 2)
> 
> Thank you.
> 
> -- 
> ******************************************************************
> Anand M.T
> School of Biotechnology (Bio-Informatics),
> International Instituteof Information Technology (I2IT),
> P-14, Rajiv Gandhi Infotech park,
> Hinjewadi,
> Pune-411 057.
> INDIA.
> 
> "The secret of success comprised in three words.. Work, Finish & Publish" -
> Michael Faraday
> 
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