[R] unable to load Hmisc in R 2.14.0

[Brian Diggs]

On 11/10/2011 11:32 AM, Jacob Wegelin wrote:
>
> On my MacBook Pro (OS 10.6.8), after updating to R version 2.14.0
> (2011-10-31) and reinstalling the Hmisc package, I am unable to load the
> Hmisc library.
>
> Hmisc was working *before* I updated R.
>
> Any idea what's wrong?

Likely the same problem as discussed in this thread:

https://stat.ethz.ch/pipermail/r-sig-mac/2011-November/008760.html

> Details below.
>
>> install.packages("Hmisc", dependencies=TRUE)
> trying URL
> 'http://cran.case.edu/bin/macosx/leopard/contrib/2.14/Hmisc_3.9-0.tgz'
> Content type 'application/x-gzip' length 1457353 bytes (1.4 Mb)
> opened URL
> ==================================================
> downloaded 1.4 Mb
>
>
> The downloaded packages are in
> /var/folders/HR/HRdt7XjbGC4gfgEM2M7yWE+++TM/-Tmp-//RtmpvPPB8R/downloaded_packages
>
>> library(Hmisc)
> Error in dyn.load(file, DLLpath = DLLpath, ...) :
> unable to load shared object
> '/Library/Frameworks/R.framework/Versions/2.14/Resources/library/Hmisc/libs/x86_64/Hmisc.so':
>
> dlopen(/Library/Frameworks/R.framework/Versions/2.14/Resources/library/Hmisc/libs/x86_64/Hmisc.so,
>
> 6): Library not loaded:
> @rpath/R.framework/Versions/2.14/Resources/lib/libR.dylib
> Referenced from:
> /Library/Frameworks/R.framework/Versions/2.14/Resources/library/Hmisc/libs/x86_64/Hmisc.so
>
> Reason: image not found
> Error: package/namespace load failed for ‘Hmisc’
>>
>> sessionInfo()
> R version 2.14.0 (2011-10-31)
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] splines stats graphics grDevices utils datasets methods
> base
>
> other attached packages:
> [1] survival_2.36-10
>
> loaded via a namespace (and not attached):
> [1] cluster_1.14.1 grid_2.14.0 lattice_0.20-0 psych_1.1.11
> tools_2.14.0
>>
>
> Jacob A. Wegelin
> Assistant Professor
> Department of Biostatistics
> Virginia Commonwealth University
> 830 E. Main St., Seventh Floor
> P. O. Box 980032
> Richmond VA 23298-0032
>
>


-- 
Brian S. Diggs, PhD
Senior Research Associate, Department of Surgery
Oregon Health & Science University