[R] R-bash beginner

Matteo Giani giani_matteo at pcteor1.mi.infn.it
Tue Nov 8 09:30:18 CET 2011

On 11/07/2011 05:17 PM, David A. wrote:
> Hi,
> I am trying to run some R commands into my bash scripts and want to use shell variables in the R commands and store the output of R objects into shell variables for further usage in downstream analyses. So far I have managed the first, but how to get values out of R script? I am using  "here documents" (as a starter, maybe something else is simpler or better; suggestions greatly appreciated).

maybe this can be helpful:


I personally didn't manage to successfully write a 'fully functional' 
script, though, because of quoting troubles and so on.

best regards,

Matteo Giani

More information about the R-help mailing list