[R] problem with makeSOCKcluster depending on R patch version

Uwe Ligges ligges at statistik.tu-dortmund.de
Mon May 16 09:37:13 CEST 2011



On 15.05.2011 16:23, Søren Højsgaard wrote:
> I just downloaded the patched version from the Danish mirror; http://mirrors.dotsrc.org/cran/
>
> That gave me: R version 2.13.0 Patched (2011-05-10 r55826) - which is *not* the version you refer to.
>
> Where may one get the latest patch then?

Latest binaries are available from 
http://cran.r-project.org/bin/windows/base/rpatched.html
which contains the build you said. I know Duncan tries to provide that 
regularly. If that fails for some reason (like it obviously did the last 
few days, obviously), you will have to build it yourself.

Best,
Uwe





> Regards
> Søren
>
>
>
>
>
> ________________________________________
> Fra: Uwe Ligges [ligges at statistik.tu-dortmund.de]
> Sendt: 15. maj 2011 15:25
> Til: Søren Højsgaard
> Cc: Ulrich Halekoh; r-help at r-project.org
> Emne: Re: SV: [R] problem with makeSOCKcluster depending on R patch version
>
> On 15.05.2011 12:27, Søren Højsgaard wrote:
>> That raises another question: Will that patched version (2011-05-13 r55886) be made available as a windows binary - and if so: when?
>
> Daily builds for WIndows of R-patched are available from CRAN.
>
> Best,
> uwe
>
>> Regards
>> Søren
>>
>>
>>
>> ________________________________________
>> Fra: r-help-bounces at r-project.org [r-help-bounces at r-project.org] På vegne af Uwe Ligges [ligges at statistik.tu-dortmund.de]
>> Sendt: 14. maj 2011 18:23
>> Til: Ulrich Halekoh
>> Cc: r-help at r-project.org
>> Emne: Re: [R] problem with makeSOCKcluster depending on R patch version
>>
>> On 13.05.2011 14:01, Ulrich Halekoh wrote:
>>> Dear,
>>>
>>> I encountered a problem using the makeSOCKcluster function depending the patched version of
>>> R-2.13.0 I used.
>>>
>>>
>>> library(snow)
>>> cl<- makeSOCKcluster(rep("localhost", 2))
>>>
>>> this works fine for the R-13.0 patch (2011-04-28 r55678)
>>> but not for the patch R-13.0 patch (2011-05-10 r55826)
>>
>>
>> If R-2.13.0 patched is meant: I do not see this with a recent  snapshot
>> (2011-05-13 r55886).
>>
>>
>> Uwe Ligges
>>
>>
>>
>>>
>>> In the latter case the command  keeps running. Interrupting the command I get the error message
>>>
>>> Error in socketConnection(port = port, server = TRUE, blocking = TRUE,  :
>>>      cannot open the connection
>>> In addition: Warning message:
>>> In socketConnection(port = port, server = TRUE, blocking = TRUE,  :
>>>      problem in listening on this socket
>>>
>>>
>>> Does work
>>>
>>> R version 2.13.0 Patched (2011-04-28 r55678)
>>> Platform: i386-pc-mingw32/i386 (32-bit)
>>>
>>> locale:
>>> [1] LC_COLLATE=Danish_Denmark.1252  LC_CTYPE=Danish_Denmark.1252
>>> [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C
>>> [5] LC_TIME=Danish_Denmark.1252
>>>
>>> attached base packages:
>>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>>
>>> other attached packages:
>>> [1] snow_0.3-3
>>>
>>>
>>> Does not work
>>>
>>> R version 2.13.0 Patched (2011-05-10 r55826)
>>> Platform: i386-pc-mingw32/i386 (32-bit)
>>>
>>> locale:
>>> [1] LC_COLLATE=Danish_Denmark.1252  LC_CTYPE=Danish_Denmark.1252
>>> [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C
>>> [5] LC_TIME=Danish_Denmark.1252
>>>
>>> attached base packages:
>>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>>
>>> other attached packages:
>>> [1] snow_0.3-3
>>>
>>>
>>> Kind regards
>>> Ulrich Halekoh
>>>
>>> Associate Professor
>>>     Aarhus University
>>> Email: Ulrich.Halekoh at agrsci.dk
>>>
>>> ______________________________________________
>>> R-help at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/r-help
>>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>>> and provide commented, minimal, self-contained, reproducible code.
>>
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.



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