[R] coxph and survfit issue - strata

Terry Therneau therneau at mayo.edu
Mon May 9 14:46:04 CEST 2011


> Dear users,
>
> In a study with recurrent events:
> My objective is to get estimates of survival (obtained through a Cox  
> model) by rank of recurrence and by treatment group.
> With the following code (corresponding to a model with a global  
> effect of the treatment=rx), I get no error and manage to obtain  
> what I want :
> data<-(bladder)
> model1<-coxph(Surv(stop,event)~rx+strata(enum) 
> +cluster(id),data=bladder)
> data1<-data.frame(rx=1)
> survfit(model1,newdata=data1)
>
> But with the model with strata by treatment interaction  
> (corresponding to a model with an effect of the treatment by rank),  
> I get the following error:
> model2<-coxph(Surv(stop,event)~rx*strata(enum) 
> +cluster(id),data=bladder)
>
> data1<-data.frame(rx=1)
>
> survfit(model2,newdata=data1)
> Erreur dans strata(enum) : objet "enum" non trouv? =>error in  
> strata(enum) : object "enum" not found

 You have neglected to tell us what version of R and of the survival
library you are using.  (As the author, I always have the newest version
of course.)

  The example you gave works if there is no "cluster" statement.  Your
error is a surprise to me and I will look into it.

 Terry Therneau



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