[R] read.table mystery
Johannes Graumann
johannes_graumann at web.de
Sun Mar 6 11:04:12 CET 2011
Hello,
Please have a look at the code below, which I use to read in the attached
file. As line 18 of the file reads "1065:>sp|Q9V3T9|ADRO_DROME
NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Drosophila melanogaster
GN=dare PE=2 SV=1", I expect the code below to produce a 3 column data frame
with most of the last column empty and line 18 to produce a data.frame row
like so:
V1
1065
V2
>sp|Q9V3T9|ADRO_DROME NADPH
V3
adrenodoxin oxidoreductase, mitochondrial OS=Drosophila
melanogaster GN=dare PE=2 SV=1
Why is that not so?
Thanks for any hint.
Sincerely, Joh
read.table(
"/tmp/testfile.txt",
sep=":",
header=FALSE,
quote="",
fill=TRUE
)[19,]
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