[R] create a new data frame after comparing two columns of the previous data frame
Nanami
deconstructed.morning at gmail.com
Tue Jun 28 01:10:55 CEST 2011
it's a table; I read it from a file; I've tried to make it look prettier:
> head(intra)
chr miRNA start end strand ACC
hsa_ID region region_start region_end
chr1 miRNA 1102484 1102578 + ACC="MI0000342"; ID="hsa-mir-200b";
exon 1102484 1102578
chr1 miRNA 1103243 1103332 + ACC="MI0000737"; ID="hsa-mir-200a";
exon 1103243 1103332
chr1 miRNA 1104385 1104467 + ACC="MI0001641"; ID="hsa-mir-429";
exon 1104385 1104467
chr1 miRNA 3044539 3044599 + ACC="MI0015861"; ID="hsa-mir-4251";
exon 3044539 3044599
chr1 miRNA 3477260 3477354 - ACC="MI0003556"; ID="hsa-mir-551a";
exon 3477260 3477354
chr1 miRNA 6489894 6489956 - ACC="MI0015864"; ID="hsa-mir-4252";
exon 6489894 6489956
When I changed && with & I got this error:
> new <- intra[(intra$start != intra$region_start )&(intra$end !=
> intra$region_end)]
Error in `[.data.frame`(intra, (intra$start != intra$region_start) &
(intra$end != :
undefined columns selected
What I would like to do is to create a new table that only contains the rows
for which column start and region_start are not the same.
--
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