[R] R

David Winsemius dwinsemius at comcast.net
Thu Jul 28 17:57:27 CEST 2011

On Jul 28, 2011, at 11:54 AM, David Winsemius wrote:

>> On Thu, Jul 28, 2011 at 8:11 AM, Rui Oliveira  
>> <rui18oliver at gmail.com> wrote:
>>> Good afternoon.
>>> I am a master student in University of Porto in Portugal. At this  
>>> moment I’m
>>> starting to use R, so I have some doubts.
>>> The aim of my analysis is:  calculate a pairwise FST matrix from  
>>> fasta file
>>> and creat a principal component analyses with adegenet package (I  
>>> use seqinr
>>> and ape package to read this file, then I convert this file into a  
>>> genind
>>> object with DNA2genind function provide in adegenet package).  
>>> After convert
>>> my file the pairwise.fst function is not found.

That suggests a problem in loading the adegenet package. You should  
post a copy of your console transcript and post sessionInfo() ... as  
is requested in the Posting Guide.

>>> If you could help me would be great.
>>> Greetings: Rui Oliveira

Sorry for the blank message. Meant to come back to edit it.

David Winsemius, MD
West Hartford, CT

More information about the R-help mailing list