[R] Rmpi fails to install

Juergen Rose rose at rz.uni-potsdam.de
Mon Jul 18 19:37:21 CEST 2011


Am Sonntag, den 03.07.2011, 18:19 +0200 schrieb rose at rz.uni-potsdam.de:
> Quoting rose at rz.uni-potsdam.de:
> 
> > Quoting Juergen Rose <rose at rz.uni-potsdam.de>:
> >
> >> Hi,
> >>
> >> I was just able to install the patched Rmpi on the second system with
> >> openmpi-1.5.3. What can we that Rmpi_0.5-9a.tar.gz becomes a standard
> >> CRAN package?
> >>
> >> Regards Juergen
> >>
> >
> > Now there is a new problem. Testing openmpi-1.5.3-r1 and
> > Rmpi_0.5-9a.tar.gz with the attached R script I got a Segmentation
> > fault or the program hangs in the vicinity of closeCluster() and
> > mpi.quit(), which does not happen with openmpi-1.4.3 and
> > Rmpi_0.5-9.tar.gz:
> 
> I forget to attach the R script. Now it should be attached.

This problem could be solved by disabling the mpi-threads flag compiling
openmpi, compare 
https://bugs.gentoo.org/show_bug.cgi?id=373923.



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