[R] Create a data frame of all possible unique combinations of factors
jim holtman
jholtman at gmail.com
Wed Jul 6 02:03:09 CEST 2011
Is this what you want:
> test <- c("A","B","C","D")
> expand.grid(test,test)
Var1 Var2
1 A A
2 B A
3 C A
4 D A
5 A B
6 B B
7 C B
8 D B
9 A C
10 B C
11 C C
12 D C
13 A D
14 B D
15 C D
16 D D
On Tue, Jul 5, 2011 at 7:16 PM, Q <quagaars at gmail.com> wrote:
> Hello,
>
> I'm trying to create a data frame where each row has a unique combination of
> factors.
>
> I start with a vector of species like so:
>
>
>
>> 1> test <- c("A","B","C","D")
>>
>
>> 1> test
>>
>
>> [1] "A" "B" "C" "D"
>>
>
> To get all species combinations I have used expand.grid like this:
>
>
>
>> 1> pairs <- expand.grid(test,test)
>
>> 1> pairs
>
>> Var1 Var2
>
>> 1 A A
>
>> 2 B A
>
>> 3 C A
>
>> 4 D A
>
>> 5 A B
>
>> 6 B B
>
>> 7 C B
>
>> 8 D B
>
>> 9 A C
>
>> 10 B C
>
>> 11 C C
>
>> 12 D C
>
>> 13 A D
>
>> 14 B D
>
>> 15 C D
>
>> 16 D D
>>
>
> Now I want to select only the unique pairs, which I have tried to do with
> the function "unique":
>
>
>
>> 1> unique(pairs)
>>
>
> , but that doesn't do anything... I guess because it considers A,B to be
> different from B,A. The data frame I would like to end up with should look
> like this.
>
>
>
>> Var1 Var2
>
>> 1 A A
>
>> 2 B A
>
>> 3 C A
>
>> 4 D A
>
>> 6 B B
>
>> 7 C B
>
>> 8 D B
>
>> 11 C C
>
>> 12 D C
>
>> 16 D D
>
>>
>
> Thanks for your help!
>
> Q
>
> --
> View this message in context: http://r.789695.n4.nabble.com/Create-a-data-frame-of-all-possible-unique-combinations-of-factors-tp3647338p3647338.html
> Sent from the R help mailing list archive at Nabble.com.
> [[alternative HTML version deleted]]
>
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> and provide commented, minimal, self-contained, reproducible code.
>
--
Jim Holtman
Data Munger Guru
What is the problem that you are trying to solve?
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