[R] Help with calculating correlation coefficient - creating a network
kparamas
kparamas at asu.edu
Tue Jan 25 20:08:04 CET 2011
Hi,
I am creating a correlation based graph for the data 27 X 3040.
I am not sure if I am allocating enough space for the data.
I am using the following .R file (which is an example for geneData)!
http://r.789695.n4.nabble.com/file/n3236801/sampleClimate.R
sampleClimate.R</nabble_a
and the data is in the file
http://r.789695.n4.nabble.com/file/n3236801/data3y3w_landmask.txt
data3y3w_landmask.txt
I am getting the following error in the line,
> net <- network(corm, directed = F)
Error in which.matrix.type(x) : subscript out of bounds
But if I use the geneData 500 X 26, it doesnt throw any error!
http://r.789695.n4.nabble.com/file/n3236801/geneData.txt geneData.txt
Please help to fix the issue.
(Note since I was having issue I took the transpose in the cor function.)
Thanks,
Kumaraguru
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