[R] Random Forest & Cross Validation

ronzhao yzhaohsph at gmail.com
Tue Feb 22 22:39:31 CET 2011


Thanks, Max.

Yes, I did some feature selections in the training set. Basically, I
selected the top 1000 SNPs based on OOB error and grow the forest using
training set, then using the test set to validate the forest grown.

But if I do the same thing in test set, the top SNPs would be different than
those in training set. That may be difficult to interpret.




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