[R] How to get the tuning parameter lamda in storey's qvalue package

[Uwe Ligges]

Just load the package and type

qvalue

so you will see what the underlying R code is. You will find some parts 
of the code may be worth to be improved, hence time to contribute to the 
package.

Uwe Ligges




On 19.04.2011 07:53, Chee Chen wrote:
> Dear All,
> In Storey's estimator of the proportion of true nulls, the estimator depends on the tuning parameter lamda.
> Suppose now that an estimator of this proportion has been obtained by the qvalue package, what is the lamda that
> corresponds to the estimate? How to get this lamda?
> Thanks,
> -Chee
>
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>
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