[R] Cannot install pakcage RMySQL
alon.benari
alon.benari at gmail.com
Wed Apr 6 17:24:40 CEST 2011
Hello All,
I have a technical difficulty installing RMySQL. I am running openSUSE11.1
and R 2.12
I have installed MySQL from the website.
and following installation , as root
This is the part where trouble begin,
......
checking mysql.h usability... no
checking mysql.h presence... no
checking for mysql.h... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking /usr/local/include/mysql/mysql.h usability... no
checking /usr/local/include/mysql/mysql.h presence... no
checking for /usr/local/include/mysql/mysql.h... no
checking /usr/include/mysql/mysql.h usability... no
checking /usr/include/mysql/mysql.h presence... no
checking for /usr/include/mysql/mysql.h... no
checking /usr/local/mysql/include/mysql/mysql.h usability... no
checking /usr/local/mysql/include/mysql/mysql.h presence... no
checking for /usr/local/mysql/include/mysql/mysql.h... no
checking /opt/include/mysql/mysql.h usability... no
checking /opt/include/mysql/mysql.h presence... no
checking for /opt/include/mysql/mysql.h... no
checking /include/mysql/mysql.h usability... no
checking /include/mysql/mysql.h presence... no
checking for /include/mysql/mysql.h... no
Configuration error:
could not find the MySQL installation include and/or library
directories. Manually specify the location of the MySQL
libraries and the header files and re-run R CMD INSTALL.
INSTRUCTIONS:
1. Define and export the 2 shell variables PKG_CPPFLAGS and
PKG_LIBS to include the directory for header files (*.h)
and libraries, for example (using Bourne shell syntax):
export PKG_CPPFLAGS="-I"
export PKG_LIBS="-L -lmysqlclient"
Re-run the R INSTALL command:
R CMD INSTALL RMySQL_.tar.gz
2. Alternatively, you may pass the configure arguments
--with-mysql-dir= (distribution directory)
or
--with-mysql-inc= (where MySQL header files reside)
--with-mysql-lib= (where MySQL libraries reside)
in the call to R INSTALL --configure-args='...'
R CMD INSTALL --configure-args='--with-mysql-dir=DIR' RMySQL_.tar.gz
ERROR: configuration failed for package ‘RMySQL’
* removing ‘/root/R/i686-pc-linux-gnu-library/2.12/RMySQL’
Any ideas how to proceed from here? I am quite a newbie in LINUX
How do I find the mysql.h ?
using find / -name mysql.h but nothing there?
Did I use it right?
Any other ideas? How do I set this right?
Thank you
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