[R] problems with siar package

Uwe Ligges ligges at statistik.tu-dortmund.de
Mon Sep 13 15:02:57 CEST 2010


Please report to the siar package maintainer (including the package 
version of siar you are using).

Best,
Uwe Ligges


On 08.09.2010 00:36, Julio Lucio Lancelotti wrote:
> Hi, my name is Julio, I'm trying to run a script, specifically with the siar
> package on R (I have attached the script) but the program collapses on
> during the run. The error message says:
>
>   *** caught segfault ***
>
> address 0xb31941cc, cause 'memory not mapped'
>
>   Traceback:
>
> 1: .C("siarmcmcv4", as.integer(numdata), as.integer(numsources),
> as.integer(numiso), as.integer(numgroups), as.integer(startgroup),
> as.integer(endgroup), as.integer(siardata$iterations),
> as.integer(siardata$burnin), as.integer(siardata$howmany),
> as.integer(siardata$thinby), as.double(prior), as.data.frame(data2),
> as.data.frame(concdepdata), as.data.frame(sourcedata),
> as.data.frame(correctionsdata), as.data.frame(parameters))
>
> 2: siarmcmcdirichletv4(target, source, fraction, iterations = 5e+05, burnin
> = 1e+05, howmany = 2000, thinby = 10)
>
>   Possible actions:
>
> 1: abort (with core dump, if enabled)
>
> 2: normal R exit
>
> 3: exit R without saving workspace
>
> 4: exit R saving workspace
>
> Selection:
>
> 0xa6737790 'memory not mapped'
>
> I'm using the library “siar”,
>
> specifically the function: siarmcmcdirichletv4
>
> #_______________
>
> However if I choose option 1 all results are saved, even those generated
> during the failure
>
>
>   Additional information:
>
> R version 2.11.1 (2010-05-31)
>
> OS: 10.04 LTS, i686 GNU/Linux
>
>
>
>   Thanks
>
>
>
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