[R] Reproducible research

[Max Kuhn]

A Reproducible Research CRAN task view was recently created:

   http://cran.r-project.org/web/views/ReproducibleResearch.html

I will be updating it with some of the information in this thread.

thanks,

Max



On Thu, Sep 9, 2010 at 11:41 AM, Matt Shotwell <shotwelm at musc.edu> wrote:
> Well, the attachment was a dud. Try this:
>
> http://biostatmatt.com/R/markup_0.0.tar.gz
>
> -Matt
>
> On Thu, 2010-09-09 at 10:54 -0400, Matt Shotwell wrote:
>> I have a little package I've been using to write template blog posts (in
>> HTML) with embedded R code. It's quite small but very flexible and
>> extensible, and aims to do something similar to Sweave and brew. In
>> fact, the package is heavily influenced by the brew package, though
>> implemented quite differently. It depends on the evaluate package,
>> available in the CRAN. The tentatively titled 'markup' package is
>> attached. After it's installed, see ?markup and the few examples in the
>> inst/ directory, or just example(markup).
>>
>> -Matt
>>
>> On Thu, 2010-09-09 at 01:47 -0400, David Scott wrote:
>> > I am investigating some approaches to reproducible research. I need in
>> > the end to produce .html or .doc or .docx. I have used hwriter in the
>> > past but have had some problems with verbatim output from  R. Tables are
>> > also not particularly convenient.
>> >
>> > I am interested in R2HTML and R2wd in particular, and possibly odfWeave.
>> >
>> > Does anyone have sample documents using any of these approaches which
>> > they could let me have?
>> >
>> > David Scott
>> >
>> > _________________________________________________________________
>> >
>> > David Scott Department of Statistics
>> >             The University of Auckland, PB 92019
>> >             Auckland 1142,    NEW ZEALAND
>> > Phone: +64 9 923 5055, or +64 9 373 7599 ext 85055
>> > Email:      d.scott at auckland.ac.nz,  Fax: +64 9 373 7018
>> >
>> > Director of Consulting, Department of Statistics
>> >
>> > ______________________________________________
>> > R-help at r-project.org mailing list
>> > https://stat.ethz.ch/mailman/listinfo/r-help
>> > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>> > and provide commented, minimal, self-contained, reproducible code.
>>
>
> --
> Matthew S. Shotwell
> Graduate Student
> Division of Biostatistics and Epidemiology
> Medical University of South Carolina
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>



-- 

Max