[R] A competition to create a recommendation engine for R packages

Kjetil Halvorsen kjetilbrinchmannhalvorsen at gmail.com
Thu Oct 28 22:29:44 CEST 2010


Follow-up. Started to look at this. First step is to make a graph
showing dependencies between R packages(CRAN, Bioconductor,Omegahat).
As a curiosum,  this graph has diameter 20:
> require(igraph)
> diameter(CRANgraph)
[1] 20
> dia <- get.diameter(CRANgraph)
> dia
 [1]  221 1866 2344 2192  330 1615  994 2603 2477 1419 1497 2920 2907 3449 2812
[16] 2630 2620 2690 2772 2789 1518
> packFrame[dia+1,1]
 [1] "GGMselect"     "network"       "sna"           "rgl"
 [5] "MASS"          "lattice"       "chron"         "zoo"
 [9] "tis"           "ggplot2"       "hexbin"        "marray"
[13] "limma"         "org.Hs.eg.db"  "annotate"      "Biostrings"
[17] "BSgenome"      "GenomicRanges" "Rsamtools"     "ShortRead"
[21] "hwriter"
>

Here is used an inclusive definition of link, using all the fields
Depends,Suggests,Imports,LinkingTo, Enhances.

Kjetil

On Sat, Oct 9, 2010 at 8:08 AM, Tal Galili <tal.galili at gmail.com> wrote:
> Hello everyone.
>
> There is a new competition, outlined on the blog
> dataists<http://www.dataists.com/2010/10/using-data-tools-to-find-data-tools-the-yo-dawg-of-data-hacking/>,
> inviting us to analyse statistics of the use of R packages (collected from
> 52 R users), to create a R-package suggestion engine for ourselves.
> Since I noticed several bloggers already wrote about it (as I have detailed
> here<http://www.r-statistics.com/2010/10/a-competition-to-recommend-relevant-r-packages-and-the-future-of-r/>),
> I thought it to be fitting to also notified the members of the R help
> mailing list as well.
>
> Best,
> Tal
>
> ----------------Contact
> Details:-------------------------------------------------------
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> www.r-statistics.com (English)
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