[R] Path to R script
David Scott
d.scott at auckland.ac.nz
Thu May 13 01:02:52 CEST 2010
Sharpie wrote:
>
> Johannes W. Dietrich wrote:
>> There is certainly a trivial solution for my question, but I can't
>> find the answer in the documentation.
>>
>> I need a platform independent method to obtain the file path of the
>> current R script.
>>
>> My working group uses R on several machines with different operating
>> systems including Mac OS X, Windows and Linux, and for obvious
>> reasons the file hierarchies are very different. Therefore, it would
>> be useful to be able to address data files and external procedures
>> relative to the path of the script.
>>
>> Thank you for any suggestion,
>>
>> J. W. D.
>> --
>>
>
> The best recipie I have for dealing with this situation is:
>
> 1. Place R scripts in a package (a very good idea anyway if you are
> distributing code to others).
>
> 2. Place a configuration file in the package that contains info such as
> paths to data directories.
>
> 3. Customize the configuration file after installing the package (if
> necessary).
>
> Then your script accesses the configuration file, which is in a known fixed
> location, and uses the information inside to find other files that may be in
> unknown and changing locations.
>
> You could also place the configuration file in a location such as:
>
> ~/.MyPackageConf
>
> Since:
>
> path.expand( '~/' )
>
> Has a pretty predictable behavior across platforms. This would save it from
> being overwritten every time you updated the package.
>
> Hope this helps!
>
> -Charlie
I also was about to suggest putting the code in a package because then
you have system.file available, which I presume works across platforms:
> system.file("RunTests.R",package="DistributionUtils")
[1] "/usr/local/david/R/DistributionUtils"
> system.file("unitTests/runTests.R",package="DistributionUtils")
[1] "/usr/local/david/R/DistributionUtils/unitTests/runTests.R"
David Scott
_________________________________________________________________
David Scott Department of Statistics
The University of Auckland, PB 92019
Auckland 1142, NEW ZEALAND
Phone: +64 9 923 5055, or +64 9 373 7599 ext 85055
Email: d.scott at auckland.ac.nz, Fax: +64 9 373 7018
Director of Consulting, Department of Statistics
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